Plant GARDEN How To ▶︎

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Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015935936.1_cds_XP_016481615.1_72926

CDS Infomation

[gene=LOC107802598] [db_xref=GeneID:107802598] [protein=CCR4-NOT transcription complex subunit 1-like] [protein_id=XP_016481615.1] [location=join(22614..22712,28743..29040,29197..29425,29526..29865,29964..30077,30455..30583,30664..30855,30943..31137,32659..32796,32952..33071,33152..33402,33997..34100,35626..35720,35798..36037,36280..36483,36564..36645,36743..36810,37271..37416,37644..37752,37838..37984,38091..38138,38258..38386,38467..38706,38787..38918,39013..39098,39206..39311,39423..39518,39646..39798,41055..41237,41328..41557,41667..41799,42040..42165,43222..43266,43438..43515,43597..43713,47410..47536,47608..47708,47816..47956,48947..49030,50318..50464,50548..50673,50763..50810,50893..51039,51117..51178,51571..51724,51827..52018,52098..52202,52351..52485,52737..52973,54211..54312,54395..54541)] [gbkey=CDS]

Sequence

ATGATTCCTTTCACCTCCACTGCTTCTTCACAGATTCGGTTTCTGCTCAATAGCCTGAAC
GCTTCCAACTCTGACACTGTTTTCCATGAGCTCCGTCAGTATCTGGCATATGGAGTTGAA
GGGAGCATATTGCTGCTTCAGACGTGCGTTGATCATCTGAATGTTTATGGAAAAGATTTG
AAGAACACACAGCTGGATCCTGTATTTGCTTCCATTTTCAGATGCATCTTGGACAAGCCA
AGTTTCAGCACTGCATTTTCTGAATCCCTAAAGGATACTGCAATTAGTGAGGAGTTTTTG
GTGAATCTCTCTAATGCTTTACAGTTGACAATATCTGAAAAAATTGGAGTTGGCCTTGCA
TTGTCAGACTCGGAAAATGTTGATGTCAGGAATTGTGGAACCAACTATTGCATGGGTCAG
ATTGCAGAATTATGTTCCACCAATTCTTCTGTAGATGATGTCATGCCAATTCAGAGTGTT
CTTTTGTATCTGGATCAATCTGAAGGCCTCTCTAAGCATGTAGACTTGTTTATGCATATG
CTATCGCTCATCCAGTCAAAAGAAGAAGTCCAGTTCATTTTAACTCCTTTGCTTTCTGAT
GAACTTCGTGAAGCTAATTTTTTGAGGAACTTAGATTTCTTAAATGATGGTGGTGAAGAT
GATTTTGATGCTCTTGTGGCAGAAATGGAGAAGGAAATGAGCATAGCGGACATAATGAAG
GAATTGGGTTATGGATGCACTGTTAATGTCTTGCAATGCAAAGAAATGTTATCTTTATTT
TTGCCGTTGACTGAAGTGACCGTTGCTAGGATACTTGGTATGATTGTACGTACCCACTCA
GGCATCGAGGATAACCAGAATGTGTTCTCAACGTTCCGTGCTGCTCTTGGTAGCAGCACT
GTATCTGATCCATCTCCATTGAATTCTTGGAATGCTGACGTCCTTATTGATGCAATAAAG
CAACTTGCTCCTGGACTTAACTGGGTAACTGTAATGGAAAACCTAGATCATGAGGGTTTC
TATGTTCCCGATGGAACAGCCTTTTCCTTTTTGATGTCCATTTACAAACATGCCTGTCAG
GATCCTTTTCCTCTTGGAGCTGTTTGCGGTTCTATCTGGAAGAATGCTGAGGGTCAGCTT
TCCTTACTCAAGTATGCTGTCTCGGTGCCTCCTGAAGTATTTACCTTCGCGCATTGTGGG
AGGCAACTGACTTATGTTGATGCGGTGAATGACCATAAGATCCAAATTGGACATGCAAAT
CATGCGTGGTTGTGTCTTGACCTTCTCGAAGTTCTTTGCCAGCTGGCTGAGAGAGGTTAT
GCAAGCTCTGTTCGATCCATTCTGGAGCACCCTTTGAAGCACTGTCCAGAAGTCTTGCTT
CTTGGGATGGCCCATATCAATACTCTGTATAATCTCCTCCAGCATGAAGTTTCCGCCGCT
GTTTTCCCTGTTATGCTAAAAAATACTGCTGCTAGTGGTATGATTCTTCATTTGTGGCAT
GTTAATCCTAGCATCTTGTTGCGAGGTCTTGTTGATGCATTGAATGTTGACCTGGAGAAC
ACCTACAAAGTCTTGGATACATGTCAAGAGCAAAAGATTCTATCATCAGTACTGGATATG
ATTCCTTATGCTTTCGGCATCAGACTTGCTGCCCTTGCTTCCCGCAAAGAACTCATGGAT
TTGGAGAAATGGTTGAGCAATAACTTAAGCACATTTAAAGATATCTTCTATGAGGAATGC
CTTAAGTTCTTGAGGGAGGTACATCTCGCTGCTCAAGATGTTGCTTCCAACCGCTTTGAT
CCTCCCAATGCCCTTTGGACTATTTATTCAGAAACTTCTTCAACCTTTTTAAAGGTACTT
AAGTCTCATTCTGGCCTAGTTTCTTCACGCCACTTATCGGAGGAGCTGGACAAGTTGCAC
ATAACATACATGGATGCTAATTCAAGGCTTAAGAGTGTTGGTGGTGCTGATTCATCCACT
TCTGATGGTTCTGATGATATTGAAGCGGAAGCAAACATATACTTCCATCAAATGTTCTCT
GGTCAGCTGACTAATGATGCAACAGTTCAAATGCTTGCTCGTTTCAAAGAATCGACTGAA
AAGAGGGAGCAAGCAATTTTCGAGTGCATGATTGCTAATCTGTTTGAAGAATACAAATTT
TTCTCCAAGTACCCAGAAAGGCAGCTCAAAATAGCTGCTGTTCTATTTGGGTCACTTATT
AAGAATCAGCTGGTAACTCATCTTGCACTTGGTATTGCCTTGCGAGCTGTCTTGGATGCG
TTGCGCAAGCCTGCTGATTCAAAGATGTTTGTTTTTGGGATTATGGCACTTGAACAGTTT
GTTGACCGTCTGATTGAATGGCCACAATACTGCAACCATATCTTGCAAATTTCTCATCTG
CGGGCAACTCATTCGGAGCTTGTTGCGTTCATTGAACGGGCGCTTGCTAGGATATCACTG
GCACATTCTGAATCAGAGGTAGGCCACAGTCCCGCTGCTGATCAATTCCATGGTCCTATC
ACATCTTCCCCAATGAATGCTGAGGGTTCAGCATTTCCGGTGGTTGGACAGGGTAGCTTG
CAGCAAAGTATGCAGGGATCCTCTTCAAACCAGCTTCCTCAGAGGCAGCAAAGTTCCTTA
GATGAGAGGAAACCCTCTGCTGTTCTCTCCAGCTACTTGAAGCCGGCTTTATCATCTGCA
GTGCAACCTGCCGCTGTTCCTTCAAGTGATACGGCTGGCATTCAGAAGCCACAGGGTTCA
GTCGGTGCTTCAGCAGTACTCACTTCTTCTCCTGGCTTTCTTCGTCCATCTCGGGCCATT
ACCTCAGCAAGATTTGGTTCTGCGTTGAATATTGAAACGCTTGTTGCTGCTGCAGAGAGA
AGAGAAACACCCATAGAGGCTCCTCCATCAGAAATTCAGGATAAGATATCATTTATAATT
AATAACTTATCTGCGGCAAATATTGAAGCTAAAGCGAAAGAGTTTACTGGAATTTTGGAA
GAGCAGTACTACCCGTGGTTTGCTCAGTATATGGTGATGAAAAGAGCAAGCATTGAGCCA
AATTTTCATGACTTGTACCTGAAGTTCCTAGATAAAGTAACTTCAAAAGCTTTGTACAAG
GAGATTGTGCAAGCAACCTACGAGAATTGCAAGGTTCTTTTAGGGTCAGAATTGATAAAA
TCGAGTTCAGAAGAGCGTTCGTTGCTGAAAAACCTTGGAAGCTGGCTAGGGAAAATTACA
ATTGGAAGGAATCAAGTCTTGAGGGCGCGGGAGATCGATCCAAAGTCTTTGATTATAGAG
GCGTATGAAAAAGGTTTGATGATTGCAGTTATTCCTTTTACTTCGAAGGTTCTGGAACCA
TGCCAAAGCAGTCTAGCATACCAACCGCCTAACCCTTGGACCATGGGTATTCTTGGGTTA
CTTGCTGAGATTTACGCAATGCCAAATCTTAAAATGAATCTCAAATTTGACATTGAGGTC
CTGTTCAAAAATCTTGGTGTGGATCTAAAAGAGGTAGTTCCAACTTCTCTTCTCAAGGAC
AGGGTGAGAGAAGTGGAAGGAAATCCTGACTTCTCAAACAAGGATGTTGGATCTTCCCAA
CCACCTATCGTGGGTGATGTCAAATCTGGCATTATATCTTCACTAAACCAGGTTGAACTA
CCACTTGAGGTTCCCAGTCCTTCTCATCCTAGTGGCCCTTCGCGTATTTTAACTCAGTAT
GCTGCTCCTCTTCATATTCCATCTGCTCCAATGACGGAGGATGAGAAGCTAGCAGCGCTT
GGGCTGTCTGATCAACTTCCTTCTGCTCAAGGTCTTTTACAAGGGCAATCACCTTTTTCT
GTTGGTCAGCTTCCTGCGCCTGCATCTAATATTGAGCAGCAATTTGTTGTCAATCCTAAG
CTTCATGCTCTGGGCCTGCAGTTGCATTTTCAGAGCGTACTTCCCATTGCTATGGATAGA
GCTATCAAAGAGATTGTGTCCAGCATTGTGCAGCGCAGTGTTTCTATAGCAACTCAGACA
ACAAAGGAACTTGTTTTAAAGGACTATGCCATGGAATCGGATGAGACCCGCATATGTAAT
GCTGCACATTTGATGGTTGCCAGTTTGTCAGGAAGTCTCGCTCATGTGACATGCAAGGAA
CCTTTACGTGGTTCAATATCGGGCCAGCTTCGTACTTTACTTCAGGGATTGGGTATTGCA
AGTGAGCTCCTTGAACAAGCTGTTCAGCTTGTTACTAATGACAATCTCGATCTTGGCTGT
GCAATGATCGAACAAGCAGCAACGGATAAGGCTGTACAGACTATTGATGGAGAAATAGCT
CAACAGCTGGCCATAAGAAGGAAGCACAGAGACGGTGTTGGTCCCACATTTTTTGATGCA
AGCCTTTATACACAAGGACATATGGGTGGTTTACCAGAAGCTCTTCGCCCTAAACCTGGC
CGCTTATCCCATTCTCAGCAACGGGTTTATGAGGATTTTGTCCGCTTACCTTTGCAAAAT
CAATCAAGCCAAAGCCCAAGCGCCGTTCCTGCTGGTCCTTCAACTTCTTCTGGTAGCGGT
GGCGTCTCCAGGGCGTATATGGCTGGAACTGGACAAATGAACCCCAACCTTTACTCGTCT
GGCCTTGTAAATGCAGGAGTTAGTGCTGTTCCGCAGCCATTGGAAATATCAGATGAGATA
GATACTTCATCTCAGCTTAATAGTGCATCTTCTCCCCATCTTGGGATGGGTGATAGTGCG
GCTTCTAACAATTTTGAAACCGAGGCTATTGCTGAACCATTCACATCGGTGTCAGCTCCT
GAATTGCATCCACTGGAACCTTCAAACATTGCAAAGGAGCCGGGAGCTTCTTTACAGCCA
TCGAATGCAACAGCTGCCTCTGAACGTGTTGGAAATAGTATCTCGGAACCGTTGCTGACA
ACTGGTGATGCTTTGGATAAGTACCAGATTATTTCTGAAAAGCTGGAAAGCCTGGTGAGT
GAAGAAGCTAAGGAGGCAGAAATTCAGGCGCTTATTGCTGAAGTTCCGGTAATCATCCTC
AAATGTATTAGTAGAGATGAGGCTGCCTTGGCAGTGGCCCAGAAGGCTTTCAAGGGATTG
TATGAAAATGCATCAAATAGTGCACATATTGGTGCTCATCTTGCAATTCTGGCTTCAATC
CGTGATGTTAGCAAGCTTTTTGTTAAGGAGCTAACTAGCTGGGTTATTTACTCTGACGAG
GAGCGGAAGTTCAACAAAGACATTACGGTTGGTTTGATACGGAGTGAACTGCTAAACCTT
GCCGAGTATAATGTGCACATGGCTAAATTACTTGATGCTGGCAGAAACAAATCTGCTACT
GAATTTGCTATTTCTCTAATTCAAACGCTGGTGATAAGTGATTCTAGAGTAATATCAGAG
CTACAAAACCTTGTTGAAGCGCTGGCTAAGATTGCAGCAAGACCAGGGTCTCCTGAGTCT
CTACAACAACTAGTGGAGATCGCTAAGAACCCTGCTGCTGCTAATGCTGCTGCGCTGTCT
AGTGTTACTTTTGGGAAGGAGGATAGCAACAAACAATCTAGAGACAAAAAGATTGCTGGG
CCTGCTACTGGTACCAGAGAAGATTATGGTGTTTCTGAATCTGTTGAACCAGATCCTGCA
GGCTTTCGAGAGCAGGTCTCTATGCTGTTTGCTGAATGGTACCGTATTTGTGAAATTCCG
GGAGCGAATGATGCAACTCATGCTCATTATATCCTGCAATTGCACCAGAGTGGCCTATTA
AAAGGCGATGAAACTTCAGATCGTTTTTTCCGCAGACTCACGGAACTTTCCGTTTCGCAT
TGCCTTTCGTCTGAGGTTATTAGTTCCACCCCTCAATCTCACCAAGCACAACCTCTATCG
TTCCTTGCAATTGATATCTATGCCAAATTAGTGTTCTCAATTTTGAAGTTTTATCCTGTG
GATCAGGGATCTAGTAAATTATTGCTGCTGCCAAAGGTTCTTGCTGTCACTGTCAAATTC
ATCCAGAAAGACTCTGAGGAAAAAAAGATGACATTTAATGCTAGACCATATTTTAGGCTT
TTCATCAATTGGCTATTGGATCTCTGTTCCCTGGACCCTGTTTTTGACGGTGCAAACTTT
CAGGTTTTAACAGCTTTGGCCAATGCCTTCCATGCTCTTCAGCCCCTCAAAGTTCCAGGA
TTCAGCTTTGCATGGCTTGAACTTGTAAGTCACCGAAGTTTTATGCCGAAACTTCTTGCT
GGAAATGCTCAGAAGGGGTGGCCTTATTTTCAGCGGTTGTTGGTGGACCTCTTCCAGTTT
ATGGAGCCCTTTCTTAGGAATGCTGAGCTAGGAGAACCGGTCCAGTTTCTGTATAAAGGG
ACTCTCAGGGTTTTGTTGGTTCTCCTTCATGATTTTCCAGAGTTTCTGTGTGACTACCAT
TTCAGCTTCTGTGATGTTATCCCTCCAAGCTGCATACAAATGCGAAATATAATTTTAAGT
GCATTTCCTCGCAACATGAGGCTTCCTGATCCATCAACTCCCAACTTAAAGATTGATCTA
CTTGCAGAGATTAGTCAATCCCCTCGCATTCTTTCTGAAGTTGATGCAGCTCTTAAAGCA
AAGCAGATCAAGGGTGATGTAGATGAATATCTGAAGACAAGGCAACAAGGATCTCCATTC
GTGAGTGAATTGAAGCAGAAGTTGCTGCTCTCTCCAAGTGAAGCCGCCAAGGCTGGGACA
CGCTACAATGTACCCCTTATCAACTCCCTTGTACTCTATGTTGGAATGCAGGCTATCCAG
CAGCTGCAGGCAAAAACTCCTCATGCACAGTCGATGCCCAGTAGTGTTCCATTTGCAGTA
TTCTTGGTTGGTGCTGCTCTGGATATTTTCCAGACTTTAATAATGGACTTGGACACGGAG
GGGCGTTACTTGTTTTTGAATGCAGTCGCTAATCAATTGCGCTACCCAAACAATCACACG
CATTATTTCTCCTTTATTCTGCTCTACCTATTTGCGGAATCAAATCAGGAGATGATCCAA
GAGCAGATAACCAGAGTCCTATTAGAACGCCTGATTGTGAATCGACCTCATCCGTGGGGT
CTCCTGATCACGTTCATTGAGCTTATAAAGAATCCTAGGTACAACTTTTGGAGTCGACCA
TTTACAAGATGTGCTCCAGAGATAGAGAAACTGTTTGAGTCTGTCTCAAGATCATGTGGT
GGCCCTAAACCTGTGGATGAGAGCGTGGTGTCAGGTGGAATACCTGATATCCATTAG

Peptide Sequence

PEP ID

XP_016481615.1

PEP Infomation

PREDICTED: CCR4-NOT transcription complex subunit 1-like [Nicotiana tabacum]

Sequence

MIPFTSTASSQIRFLLNSLNASNSDTVFHELRQYLAYGVEGSILLLQTCVDHLNVYGKDL
KNTQLDPVFASIFRCILDKPSFSTAFSESLKDTAISEEFLVNLSNALQLTISEKIGVGLA
LSDSENVDVRNCGTNYCMGQIAELCSTNSSVDDVMPIQSVLLYLDQSEGLSKHVDLFMHM
LSLIQSKEEVQFILTPLLSDELREANFLRNLDFLNDGGEDDFDALVAEMEKEMSIADIMK
ELGYGCTVNVLQCKEMLSLFLPLTEVTVARILGMIVRTHSGIEDNQNVFSTFRAALGSST
VSDPSPLNSWNADVLIDAIKQLAPGLNWVTVMENLDHEGFYVPDGTAFSFLMSIYKHACQ
DPFPLGAVCGSIWKNAEGQLSLLKYAVSVPPEVFTFAHCGRQLTYVDAVNDHKIQIGHAN
HAWLCLDLLEVLCQLAERGYASSVRSILEHPLKHCPEVLLLGMAHINTLYNLLQHEVSAA
VFPVMLKNTAASGMILHLWHVNPSILLRGLVDALNVDLENTYKVLDTCQEQKILSSVLDM
IPYAFGIRLAALASRKELMDLEKWLSNNLSTFKDIFYEECLKFLREVHLAAQDVASNRFD
PPNALWTIYSETSSTFLKVLKSHSGLVSSRHLSEELDKLHITYMDANSRLKSVGGADSST
SDGSDDIEAEANIYFHQMFSGQLTNDATVQMLARFKESTEKREQAIFECMIANLFEEYKF
FSKYPERQLKIAAVLFGSLIKNQLVTHLALGIALRAVLDALRKPADSKMFVFGIMALEQF
VDRLIEWPQYCNHILQISHLRATHSELVAFIERALARISLAHSESEVGHSPAADQFHGPI
TSSPMNAEGSAFPVVGQGSLQQSMQGSSSNQLPQRQQSSLDERKPSAVLSSYLKPALSSA
VQPAAVPSSDTAGIQKPQGSVGASAVLTSSPGFLRPSRAITSARFGSALNIETLVAAAER
RETPIEAPPSEIQDKISFIINNLSAANIEAKAKEFTGILEEQYYPWFAQYMVMKRASIEP
NFHDLYLKFLDKVTSKALYKEIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKIT
IGRNQVLRAREIDPKSLIIEAYEKGLMIAVIPFTSKVLEPCQSSLAYQPPNPWTMGILGL
LAEIYAMPNLKMNLKFDIEVLFKNLGVDLKEVVPTSLLKDRVREVEGNPDFSNKDVGSSQ
PPIVGDVKSGIISSLNQVELPLEVPSPSHPSGPSRILTQYAAPLHIPSAPMTEDEKLAAL
GLSDQLPSAQGLLQGQSPFSVGQLPAPASNIEQQFVVNPKLHALGLQLHFQSVLPIAMDR
AIKEIVSSIVQRSVSIATQTTKELVLKDYAMESDETRICNAAHLMVASLSGSLAHVTCKE
PLRGSISGQLRTLLQGLGIASELLEQAVQLVTNDNLDLGCAMIEQAATDKAVQTIDGEIA
QQLAIRRKHRDGVGPTFFDASLYTQGHMGGLPEALRPKPGRLSHSQQRVYEDFVRLPLQN
QSSQSPSAVPAGPSTSSGSGGVSRAYMAGTGQMNPNLYSSGLVNAGVSAVPQPLEISDEI
DTSSQLNSASSPHLGMGDSAASNNFETEAIAEPFTSVSAPELHPLEPSNIAKEPGASLQP
SNATAASERVGNSISEPLLTTGDALDKYQIISEKLESLVSEEAKEAEIQALIAEVPVIIL
KCISRDEAALAVAQKAFKGLYENASNSAHIGAHLAILASIRDVSKLFVKELTSWVIYSDE
ERKFNKDITVGLIRSELLNLAEYNVHMAKLLDAGRNKSATEFAISLIQTLVISDSRVISE
LQNLVEALAKIAARPGSPESLQQLVEIAKNPAAANAAALSSVTFGKEDSNKQSRDKKIAG
PATGTREDYGVSESVEPDPAGFREQVSMLFAEWYRICEIPGANDATHAHYILQLHQSGLL
KGDETSDRFFRRLTELSVSHCLSSEVISSTPQSHQAQPLSFLAIDIYAKLVFSILKFYPV
DQGSSKLLLLPKVLAVTVKFIQKDSEEKKMTFNARPYFRLFINWLLDLCSLDPVFDGANF
QVLTALANAFHALQPLKVPGFSFAWLELVSHRSFMPKLLAGNAQKGWPYFQRLLVDLFQF
MEPFLRNAELGEPVQFLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPSCIQMRNIILS
AFPRNMRLPDPSTPNLKIDLLAEISQSPRILSEVDAALKAKQIKGDVDEYLKTRQQGSPF
VSELKQKLLLSPSEAAKAGTRYNVPLINSLVLYVGMQAIQQLQAKTPHAQSMPSSVPFAV
FLVGAALDIFQTLIMDLDTEGRYLFLNAVANQLRYPNNHTHYFSFILLYLFAESNQEMIQ
EQITRVLLERLIVNRPHPWGLLITFIELIKNPRYNFWSRPFTRCAPEIEKLFESVSRSCG
GPKPVDESVVSGGIPDIH

Transcript Sequence

Gene sequence data has not been registered.